CDS

Accession Number TCMCG081C37669
gbkey CDS
Protein Id XP_002276057.1
Location complement(join(9695522..9695608,9696054..9696122,9696747..9696794,9697470..9697547,9697785..9697898,9698006..9698197,9698262..9698389,9698494..9698550,9698793..9698916,9700039..9700104,9700508..9700663,9700840..9700896,9701400..9701444,9701714..9701809,9702019..9702094,9702996..9703122,9704621..9704684,9704906..9704973,9705275..9705353,9705654..9705731))
Gene LOC100249755
GeneID 100249755
Organism Vitis vinifera

Protein

Length 602aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA33471
db_source XM_002276021.3
Definition PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 [Vitis vinifera]

EGGNOG-MAPPER Annotation

COG_category KL
Description RNA polymerase II transcription factor B subunit
KEGG_TC -
KEGG_Module M00290        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K03141        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03022        [VIEW IN KEGG]
ko03420        [VIEW IN KEGG]
ko05203        [VIEW IN KEGG]
map03022        [VIEW IN KEGG]
map03420        [VIEW IN KEGG]
map05203        [VIEW IN KEGG]
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0000439        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005667        [VIEW IN EMBL-EBI]
GO:0005675        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006360        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016591        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032806        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044798        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070816        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090575        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902554        [VIEW IN EMBL-EBI]
GO:1902911        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTGGCGAGGTCCTGAAGCGTGCTAGGTACAAGACGTCAGTCAAGGACTCTGGAGTTGCGGGTGTTCTGAAAATGACTGAGGACAAATTTGTATTCATGCCTAATGACCCCACATCATCTGCAAGGTTCGATGTTGAGTTTCGGTTCATTAAAGGTCACAAATTTAGCAAGGGGGGATCAAATAAACCTGCATTGCTTAATCTCACACAAGATTCCGAAAAGGGTGGAGGTTACATTTTTGAGTTTGAAAACTATCCAGACCGTGAAGTTTGCCGAGAATTTGTGGGCAGAGCCCTTGCAAAATTCAGTGAGGCTTCAAAAGCTGGTTCTGAACAATCTGCGGTTAAACTTTTTGATGAGCAACTTAGTACCATAGAAATGGAGCGCCGGATAAAGCTACTGCGAGAGGATAGTGAGTTGCAGAAACTTCATAAGCAATTTGTACTCAGTGGTGTCTTGACAGAAGCTGAATTTTGGGCAACTAGGAAGAAATTGCTGGATGGGAATACTAGTAGAACTTCAAAACAACGTGTGGGATTCAAAAGTGCCATGATATCGGATCTTAAACCATTGACTGATGGTCGGACAAACAGAGTTACATTTAACTTGACACCAGAAATAATTCATCAGATTTTTGCTGAGAAACCAGCTGTTCATCAGGCATTTTTGAATTTTGTTCCCAATAAGATGACAGAAAAGGACTTCTGGAACAAATATTGTAGAGCCGAATACCTTCATTGTACGAGAAACACAGTTGCTGCTGCAGCAGAGGCTGCTGAAGATGAGGAACTTGCTGTTTTCTTGAAGCATGATGATATATTGGCCAATGAAGCTCGGCGGAAGATCAGACGGGTTGATCCAACTTTGGACATGGAGGCTGACCAGGGGGATGATTATATGCATCTTCCGGATCATGGTATCTTTCGTGATGGTAGCAAGGAAATTATTGACCCACAATATGAGCAATATAGAAGGACTCTTTCACAAGACCTTAATCGGCATGCTGCAGTTGTTCTTGAAGGAAGACCTATAGATGTGGAGTTGGAAGACACAAGAACTGTAGCAGAGGCTCTTGCCAAGTCGAAACGGGTTGAGGCAGCTAATGAAAAATCTGATGGGAGTGTAACCCGGGAAAGATTAGAAAGGATTTCTCGGATGACTGAGATTGAGGATCTTCAGGCACCTCGTGACCTTCCATTTGCAGCACTTTGCATTAAGGATCCTCGTGACTATTTTGATTCCCAACAAGCGAATGCATTAAAAACTTTGGGAGACACCCTAGCCGGATCAAAGCAAATAAAATGCAGCCTGAGCACCCAGGAAGCATATGGTTCTTTGAGAGGATTTATTTCTGAGATCAAATCTGTAGGATTAAGTGATCCCATAGTTAAACCTGATATTGCTCTTAAGGTTCTTAATGGGTTGACCCAGAATATCTCAAGTACCAAGTTCCATCTTGGGAAGAATCCTCAAGAAAGCGTTCTGGATAGATTGCCAATCATTACTAAAGAGGAATTGCTACATCATTGGACCTCAATTCAAGAATTACTGAGACATTTCTGGTCGTCATATCCAATTACAACTACATATCTTTATACTAAGGCAAGCAGGCTAAAAGATGCCATGTCTCAAATTTATCCAAAGCTACAGGAGATAAAGGAATCTGTGCAGTCTGATTTTAGGCATCAAGTTTCCCTCCTTGTTCAACCAATGCTTCAGGCTCTAGATGCTGCTTTTGCACATTATGATGCAGACCAACAGAAGAGATCAGCGCGAAGTGGAGAAAGACCCAATGGATTTGTCTAG
Protein:  
MSGEVLKRARYKTSVKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGGSNKPALLNLTQDSEKGGGYIFEFENYPDREVCREFVGRALAKFSEASKAGSEQSAVKLFDEQLSTIEMERRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQRVGFKSAMISDLKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHCTRNTVAAAAEAAEDEELAVFLKHDDILANEARRKIRRVDPTLDMEADQGDDYMHLPDHGIFRDGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKRVEAANEKSDGSVTRERLERISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANALKTLGDTLAGSKQIKCSLSTQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISSTKFHLGKNPQESVLDRLPIITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAMSQIYPKLQEIKESVQSDFRHQVSLLVQPMLQALDAAFAHYDADQQKRSARSGERPNGFV